Identification of the soil physicochemical and bacterial indicators for soil organic carbon and nitrogen transformation under the wheat straw returning.

Wheat straw returning is widely practiced in agriculture; therefore, it is critical to determine the physicochemical and bacterial indicators in soil for the organic carbon storage, accumulative C mineralization, total nitrogen improvement, and nitrogen mineralization in various soil types after wheat straw returning. This study evaluated the influenced indicators of wheat straw addition on soil organic carbon and nitrogen transformation in diverse soil types. For this purpose, an incubation experiment was conducted to analyze the carbon and nitrogen transformation in soil from eight Chinese provinces treated with the same dry weight of wheat straw. The results indicated that the primary physicochemical and bacterial indicators that predict the carbon and nitrogen transformations in the acidic and alkaline soils were different. Of all the natural physicochemical properties of soil, cation exchange capacity and clay content were significantly correlated with organic carbon, mineralized carbon, total nitrogen, and mineralized nitrogen in the alkaline soil. In the acidic soil, the initial C/N ratio of soil was the most significant indicator of carbon and nitrogen transformation. From the perspective of the carbon- and nitrogen-relating bacterial communities, Proteobacteria were largely responsible for the accumulative C mineralization in both types of soil. Furthermore, Proteobacteria strongly regulated the organic carbon storage in the acidic soil after wheat straw addition, whereas Gemmatimonadetes was the main predicted indicator in the alkaline soil. Additionally, total nitrogen and mineralized nitrogen levels were largely explained by Bifidobacterium and Luteimonas in the alkaline soil and by Nitrospira and Bdellovibrio in the acidic soil. Soil physicochemical and biological properties significantly influence soil carbon and nitrogen transformation, which should be considered crucial indicators to guide the rational regulation of straw return in several areas.

Soil nitrogen cycling gene abundances in response to organic amendments: A meta-analysis.

Quantification of nitrogen (N) cycling genes contributes to our best understanding of N transformation processes. The application of organic amendment (OA) is widely recognized as an effective measure to improve N management and soil fertility in various ecosystems. However, our understanding of N-cycling gene abundances in response to OA application remains deficient. We performed a meta-analysis embracing 124 sets of observation data to study the impact of OA application on the main N-cycling gene abundances, including nifH, amoA, nirS, nirK and nosZ. We found that the significantly positive response of N-cycling gene abundances to OA application was attributed to the rotation cropping system (by 6.45 %-104.20 %) in the field experiment (by 19.43 %-52.56 %), OA application alone (by 8.29 %-111.70 %) especially manure addition (by 33.43 %-98.70 %), application dose of OAs within 10-20 t ha-1 (by 45.33 %-381.90 %), fertilization duration <5 years (by 43.69 %-112.63 %), C/N of OA <25 (by 37.87 %-160.90 %), SOC lower than 1.2 % (by 41.44 %-157.89 %) and application to alkaline soil (by 32.24 %-134.40 %). Moreover, soil organic carbon (SOC) and pH were the most essential regulators associated with N-cycling gene abundances with OA application. Identification of key driving factors of the abundance of N-cycling functional genes will help remedy strategies for managing OAs in ecosystems.

Recyclable water-modified deep eutectic solvents for removal of multiple heavy metals from soil.

Removing heavy metals from soil has always been a challenge in terms of safety and effectiveness. Deep eutectic solvents (DESs) are recognized as environmentally friendly reagents with great potential in the removal of heavy metals from soil. In this study, water was introduced as a third component to form new ternary deep eutectic water solvents (DEWSs) to improve their performance. The removal capacity, applicable conditions and mechanisms of sixteen DEWSs for heavy metals were systematically investigated. Experimental results showed that the presence of water significantly enhanced the removal efficiency of three DESs (Choline chloride plus Urea, DEU; Choline chloride plus l-lactic acid, DELA; and Choline chloride plus Ethylene glycol, DEEG) for heavy metals. However, as the molar ratio of water increased, the eutectic systems in the DEWSs weakened and eventually disappeared. Under optimum conditions, DEWLA7 (DELA : H2O = 2 : 8) showed the highest removal rate for cadmium, lead, copper and zinc, which were 43.42%, 94.73%, 90.72% and 96.44%, respectively. Hydrogen bonding, adsorption of oxygen functional groups, exchangeable hydrogen substitution, changes in viscosity properties and co-precipitation all contributed to the removal of heavy metals by DEWLA7. Notably, DEWLA7 had no significant effect on the content of major minerals and nutrients in the soil. Furthermore, DEWLA7 proved to be reusable for soil washing, and still retains a high removal rate of 37.32%-83.66% after multi-stage filtration treatment. Therefore, DEWLA7 was an unexplored and excellent soil washing agent with great potential in economic and social benefits.

Sports game intervention aids executive function enhancement in children with autism - An fNIRS study.

Executive dysfunction is a prevalent issue in children diagnosed with autism spectrum disorder (ASD). While the efficacy of physical exercise in enhancing cognitive abilities in these children is well-documented, research exploring the relationship between physical exercise and brain function remains limited. This study aimed to investigate the impact of cognitively stimulating exercise on executive functions (EF) in children with ASD. The study enrolled thirty children with ASD who were randomly allocated into two groups: a sports game learning group (n = 15) and a control group (n = 15). Functional near-infrared spectroscopy was utilized to monitor cerebral function alterations pre- and post- an eight-week intervention program. The study focused on three core components of executive function: working memory, inhibitory control (IC), and cognitive flexibility (CF). Results revealed a significant improvement in the EF in the intervention group. After eight weeks of intervention, neural activity, along with improved EF performance, was enhanced significantly in the prefrontal cortex (PFC). During post-intervention, EF tasks were also significantly activated in the dorsolateral PFC, orbitofrontal cortex, and frontal pole area. Furthermore, an increase in short-distance functional connectivity within the PFC was observed during resting states. These results imply that engagement in sports game training can significantly improve EF information processing, augmenting task-related cortical activations and the efficiency of brain function networks in children with ASD.

Working Regime Criteria for Microscale Electrohydrodynamic Conduction Pumps.

We investigated the microscale electrohydrodynamic (EHD) conduction pumps in a wide range of working regimes, from the saturation regime to the ohmic regime. We showed that the existing macro- and microscale theoretical models could not accurately predict the electric force of microscale EHD conduction pumps, especially for the cases of a strong diffusion effect. We clarified that the failure is caused by a rough estimate of the heterocharge layer thickness. We revised the expression of heterocharge layer thickness by considering the diffusion effect and developed a new theoretical model for the microscale EHD conduction pumps based on the revised expression of heterocharge layer thickness. The results showed that our model can accurately predict the dimensionless electric force of the microscale EHD conduction pumps even for the cases of a strong diffusion effect. Furthermore, we developed a working regime map of microscale EHD conduction pumps and found that the microscale EHD conduction pumps more easily fall into the saturation regime compared with the macroscale EHD conduction pumps due to the enhanced diffusion effect; in other words, the microscale EHD conduction pumps have a wider saturation regime. We showed that the conduction number C0 could not distinguish the working regime of the microscale EHD conduction pumps because it does not take the diffusion effect into account. By employing the revised expression of heterocharge layer thickness, we proposed a new dimensionless number, C0D to distinguish the working regimes of microscale EHD conduction pumps.

Contribution of ammonia-oxidizing archaea and bacteria to nitrogen transformation in a soil fertilized with urea and organic amendments.

The contribution of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) is crucial for nitrogen transformation. The effects of four organic amendments (OAs) plus urea on soil nitrogen transformation and the contribution of the ammonia-oxidizing microbial community were investigated using an incubation experiment. The OAs plus urea treatments included pig manure plus urea (PM + U), wheat straw plus urea (WS + U), compost plus urea (CP + U) and improved-compost plus urea (IC + U), while no OAs and urea amended control was noted as CK. The abundance and composition of AOA and AOB were determined using high through-put sequencing. Compared with CK, the OA plus urea treatments significantly enhanced the amount of total mineralized nitrogen released during the incubation process. After incubation, the highest mineralized nitrogen and net nitrogen mineralization was under the PM + U treatment and the lowest was in the WS + U treatment. In conclusion, among all OA plus urea treatments, the microbial biomass nitrogen content was the highest in WS + U treatment and dissolved organic nitrogen content was the highest with the PM + U treatment. Additionally, the abundance of AOB was inhibited in comparison to that of AOA; however, AOB contributed more to nitrification than AOA. Soil NO3--N and dissolved organic nitrogen were the principal components influencing the distribution of AOA and AOB. The result illustrated that the OAs plus urea, especially PM plus urea promoted mineralization to produce more dissolved organic nitrogen and NH4+-N, thus accelerating the growth of AOB to strengthen nitrification in soil.

New insights into the sustainable use of soluble straw humic substances for the remediation of multiple heavy metals in contaminated soil.

This study addresses the research gap in understanding the differences in straw decomposition and variations in humic substances (HS) extracted from various treatment conditions. The aim is to explore the potential of soluble straw HS in remediating heavy metal pollution in soils. The study characterizes straw decomposition structures using scanning electron microscopy (SEM) and X-ray diffraction (XRD), while employing gel permeation chromatography (GPC) and fluorescence spectroscopy (EEM) to analyze the molecular weight and degree of humification of extracted straw HS. The removal efficiency of HS for heavy metals is assessed, with a focus on aerobic humic substances (AE-HS) showing the highest potential for heavy metal removal. Spectral analysis and mass spectrometry analysis reveal the role of phenolic compounds, carboxylic acids, and aromatic compounds in AE-HS, forming humates or complexes to remove heavy metals from contaminated soil. Notably, the optimized AE-HS achieved the highest removal efficiency of 96.18 %, 82.75 %, 60.43 %, and 41.66 % for cadmium, copper, zinc, and lead, respectively. This study provides new insights into the preparation of straw for use as a heavy metal remover and has implications for the use of straw humic substances in soil remediation.

Spatiotemporal adaptive attention graph convolution network for city-level air quality prediction.

Air pollution is a leading cause of human diseases. Accurate air quality predictions are critical to human health. However, it is difficult to extract spatiotemporal features among complex spatiotemporal dependencies effectively. Most existing methods focus on constructing multiple spatial dependencies and ignore the systematic analysis of spatial dependencies. We found that besides spatial proximity stations, functional similarity stations, and temporal pattern similarity stations, the shared spatial dependencies also exist in the complete spatial dependencies. In this paper, we propose a novel deep learning model, the spatiotemporal adaptive attention graph convolution model, for city-level air quality prediction, in which the prediction of future short-term series of PM2.5 readings is preferred. Specifically, we encode multiple spatiotemporal dependencies and construct complete spatiotemporal interactions between stations using station-level attention. Among them, we design a Bi-level sharing strategy to extract shared inter-station relationship features between certain stations efficiently. Then we extract multiple spatiotemporal features with multiple decoders, which it is extracted from the complete spatial dependencies between stations. Finally, we fuse multiple spatiotemporal features with a gating mechanism for multi-step predictions. Our model achieves state-of-the-art experimental results in several real-world datasets.

Dynamics of fungal and bacterial communities in different types of soil ageing with different dosages of cadmium.

This study investigated the structure of fungal and bacterial communities in different types of Cd-contaminated soils. The results showed that obvious variations in microbial structure between contaminated alkaline soils and acidic soils. Proteobacteria, Gemmatimonadetes, Bacteroidetes and Basidiomycota dominated the studied communities in the alkaline soils, whereas Actinobacteria, Chloroflexi, Firmicutes, Acidobacteria, Saccharibacteria and Ascomycota were more abundant in the acidic soils. Additionally, Cd tolerant (Proteobacteria, Bacteroidetes, Ascomycota) and sensitive (Actinobacteria, Acidobacteria, Basidiomycota) in alkaline soils and JL-soils, Cd tolerant (Actinobacteria, Acidobacteria, Basidiomycota) and sensitive (Saccharibacteria, Proteobacteria, Bacteroidetes, Ascomycota, Mucoromycota) in the acidic soils were identified. Redundancy analysis and correlation analysis demonstrated that it was significantly affected by different environment parameters in alkaline soils and acidic soils. Varied bacterial community structures in all soils were dominantly influenced by pH and SOM. The similarities among different groups indicated the effect of soil type on microbial community structure was greater than that of Cd level. The above conclusions may provide a new perspective for the bio-remediation of Cd in different types of soils.

Response of N2O emission and denitrification genes to different inorganic and organic amendments.

Denitrification is a key biochemical process in nitrogen cycling and nitrous oxide (N2O) production. In this study, the impacts of different inorganic and organic amendments (OAs) on the abundance of denitrifying genes (nirS, nirK and nosZ) and the level of N2O emission were examined with incubation experiments. Six treatments included the indicated applications: (i) no fertilization (CK); (ii) urea application alone (U); (iii) wheat straw plus urea (U + WS); (iv) pig manure plus urea (U + PM); (v) compost product plus urea (U + CP); and (vi) improved compost product plus urea (U + IC). The results indicated that all fertilization treatments increased accumulative N2O emissions compared with the CK treatment. The U + WS, U + PM and U + CP treatments increased N2O emissions by 2.12-141.3%, and the U + IC treatment decreased N2O emissions by 23.24% relative to the U treatment. nirK was the dominant denitrification gene rather than nirS and nosZ found in soil. Additionally, the highest abundance of nirK gene was that with the U + PM treatment, and the lowest was that with the U + IC treatment. Additionally, changes in the nirK gene were highly correlated with levels of dissolved organic carbon (DOC), dissolved organic nitrogen (DON) and nitrate nitrogen (NO3-N). Automatic linear modeling revealed that N2O emission was closely related to the nirK gene, DOC and NO3-N. Overall, the use of urea and improved compost as co-amendments retarded N2O emission to a considerable degree compared with other OA additions.

Evaluation of the applicability of organic amendments from microbially driven carbon and nitrogen transformations.

Pig manure (PM), wheat straw (WS), compost product (CP) and improved compost product (IC) are very important agricultural organic resources. In this study, their applicability as soil organic fertilizations (OFs) in terms of their properties and influence on soil properties through an incubation experiment and a field verification were evaluated. The property differences indicated that wheat straw has the highest C/N ratio, and compost products contain more aromatic compounds compared with pig manure and wheat straw. The results of incubation experiment showed that OFs promoted the carbon and nitrogen transformation driven by related microorganisms and their functional metabolisms. The PM treatment had the highest proportion of Labile organic carbon to soil organic carbon (LOC/SOC) and ratio of dissolved organic carbon to soil organic carbon (DOC/SOC), while WS treatment had the lowest values. The highest net N mineralization rate and nitrification rate was observed in the WS treatment, but the lowest amounts were under the PM treatment. Additionally, the similar findings were also obtained from the field examination. Therefore, compost products were more applicable in agricultural soil as OF insight from changes in carbon, nitrogen and microbial community. Furthermore, the result of UV-vision showed that the largest amount of aromatic structure was observed in IC relative to CP. It can be concluded that CP was more conducive to fix carbon and provide available nitrogen for crops among four OFs.

Soil organic carbon transformation and dynamics of microorganisms under different organic amendments.

Organic amendments (OAs) application is a practical strategy to improve soil organic carbon (SOC) in agriculture. The present study evaluated the impact of different OAs on the transformation of carbon and the dynamics of microorganisms in a 77-day incubation experiment. The OA treatments applied included wheat straw (U + WS), pig manure (U + PM), compost (U + CP), and improved compost (U + IC), and the no amendment group was the CK. After incubation, the SOC increased significantly in the U + WS group, but the other OA treatments had no significant effect relative to the CK. Among the OA treatments, U + CP and U + IC had lower CO2-C cumulative mineralization and the highest humification of dissolved organic carbon (DOC). U + PM had the lowest SOC content and the lowest aromatization of DOC. Redundancy analyses (RDA) showed that the CO2-C cumulative mineralization directly influenced the DOC, extracted organic carbon (EOC) and microbial biomass carbon (MBC) in all treatments. Proteobacteria positively correlated with SOC and MBC, Bacteroidetes were significantly related to DOC, and Gemmatimonadetes had a significant negative relationship with CO2-C cumulative mineralization. These results showed that U + CP and U + IC were more conducive to carbon sequestration, and U + PM was the most unfavourable during the incubation. Wheat straw played an important role in the steady improvement of the SOC.

Rotundic Acid Induces DNA Damage and Cell Death in Hepatocellular Carcinoma Through AKT/mTOR and MAPK Pathways.

Hepatocellular carcinoma (HCC) is the fourth largest cause of cancer-related deaths worldwide with limited therapeutic interventions. Renewed interest in natural products as drug leads has resulted in a paradigm shift toward the rapid screening of medicinal plants for the discovery of new chemical entities. Rotundic acid (RA), a plant-derived triterpenoid, has been anecdotally reported to possess anti-inflammatory and cardio-protective abilities. The present study highlights the anti-cancer efficacy of RA on HCC in vitro and in vivo. The inhibitory effects of RA on HCC cell viability was determined by MTT. Soft agar colony formation and clonogenic assays also showed that RA inhibited HCC cell proliferation. Flow cytometry, confocal, and western blot results further indicated that RA induced cell cycle arrest, DNA damage, and apoptosis by modulating the AKT/mTOR and MAPK pathways. Besides the suppression of migration and invasion, tube formation and VEGF-ELISA revealed the anti-angiogenic abilities of RA on HCC. Moreover, RA also inhibited tumor growth in a HepG2 xenograft mouse model. To our best knowledge, this is the first extensive study of the anticancer activity of RA on HCC. The results demonstrate that RA could be a potential drug candidate for HCC treatment.

Identification and structural characterization of febuxostat metabolites in rat serum and urine samples using UHPLC-QTOF/MS.

Febuxostat is a novel nonpurine type of highly selective xanthine oxidoreductase inhibitor. A rapid and sensitive ultra-high-performance liquid chromatography-quadrupole time-of-flight mass spectrometry method for simultaneous separation and determination of febuxostat and its metabolites in rat serum and urine was developed at various time points after oral administration to the rats. The febuxostat metabolites were predicted by biotransformation software and transformed to a personal compound database to quickly determine the possible metabolites from the MS1 data. The possibility of the MS/MS fragmentation was calculated by the Molecular Structure Correlator software. As a result, five phase I and two phase II metabolites in rat serum, and seven phase I and three phase II metabolites in rat urine were identified, of which four metabolites (M2, M5, M6, M7) have not been reported before. The metabolite toxicities are predicted, and the results are helpful for the design of new xanthine oxidoreductase inhibitors.

Small-scale spatial analysis of intermediate and definitive hosts of Angiostrongylus cantonensis.

BACKGROUND: Angiostrongyliasis is a food-borne parasitic zoonosis. Human infection is caused by infection with the third-stage larvae of Angiostrongylus cantonensis. The life cycle of A. cantonensis involves rodents as definitive hosts and molluscs as intermediate hosts. This study aims to investigate on the infection status and characteristics of spatial distribution of these hosts, which are key components in the strategy for the prevention and control of angiostrongyliasis. METHODS: Three villages from Nanao Island, Guangdong Province, China, were chosen as study area by stratified random sampling. The density and natural infection of Pomacea canaliculata and various rat species were surveyed every three months from December 2015 to September 2016, with spatial correlations of the positive P. canaliculata and the infection rates analysed by ArcGIS, scan statistics, ordinary least squares (OLS) and geographically weighted regression (GWR) models. RESULTS: A total of 2192 P. canaliculata specimens were collected from the field, of which 1190 were randomly chosen to be examined for third-stage larvae of A. cantonensis. Seventy-two Angiostrongylus-infected snails were found, which represents a larval infection rate of 6.1% (72/1190). In total, 110 rats including 85 Rattus norvegicus, 10 R. flavipectus, one R. losea and 14 Suncus murinus were captured, and 32 individuals were positive (for adult worms), representing an infection rate of 29.1% of the definitive hosts (32/110). Worms were only found in R. norvegicus and R. flavipectus, representing a prevalence of 36.5% (31/85) and 10% (1/10), respectively in these species, but none in R. losea and S. murinus, despite testing as many as 32 of the latter species. Statistically, spatial correlation and spatial clusters in the spatial distribution of positive P. canaliculata and positive rats existed. Most of the spatial variability of the host infection rates came from spatial autocorrelation. Nine spatial clusters with respect to positive P. canaliculata were identified, but only two correlated to infection rates. The results show that corrected Akaike information criterion, R2, R2 adjusted and σ2 in the GWR model were superior to those in the OLS model. CONCLUSIONS: P. canaliculata and rats were widely distributed in Nanao Island and positive infection has also been found in the hosts, demonstrating that there was a risk of angiostrongyliasis in this region of China. The distribution of positive P. canaliculata and rats exhibited spatial correlation, and the GWR model had advantage over the OLS model in the spatial analysis of hosts of A. cantonensis.

[Species composition and distribution of medical mollusca in Shanghai City].

OBJECTIVE: To investigate the species diversity and distribution of medical mollusca in Shanghai City. METHODS: From August 2012 to October 2013, all kinds of habitats in 8 districts and counties in Shanghai City, namely Jiading, Qingpu, Baoshan, Minhang, Songjiang, Jinshan, Chongming, Pudong, were selected for the field survey according to the distribution characteristics of the river system, and all the specimens of medical mollusca in the investigation sites were collected and classified by morphological identification. Meanwhile, the species composition, habitats as well as the fauna of the medical mollusca collected were analyzed. RESULTS: A total of 5,211 specimens were collected, which belonged to 2 classes, 14 families, 18 genera and 25 species, including Oncomelania hupensis hupensis, Pomacea canaliculata, Parafossarulus striatulus, Alocinma longicornis, Physa acuta, Galba pervia, Hippeutis cantori, etc. The species numbers of medical mollusca in Chongming, Jinshan, Pudong new area and Qingpu districts (counties) were 22, 22, 21 and 20, respectively, which were more than those of other areas. The habitat analysis suggested that the species numbers in the river and wetland were the most, both of which were 14 species. The main faunas of the medical mollusca in Shanghai were the cosmopolitan and oriental species. CONCLUSIONS: The freshwater gastropod species are paucity in Shanghai City, but almost of them can be served as the intermediate hosts of certain parasites to transmit snail-related parasitic diseases, so the surveillance of medical mollusca should be strengthened.

[Comparative analysis of mitochondrial genomes of Angiostrongylus cantonensis].

OBJECTIVE: To compare the diversity of mitochondrial genomes of Angiostrongylus cantonensis in the mainland of China. METHODS: According to the population genetic of A. cantonensis, seven female worms were selected to characterize the mitochondrial (MT) genomes. Twelve primer pairs based on known MT genome (GQ398121) were used for PCR. The target fragments were sequenced and aligned. The gene localization, genome structure, composition of nucleotide, distribution of variable sites, and phylogeny were analyzed by employing multiple softwares. RESULTS: Five distinct types were identified from seven complete MT genomes. They were similar in size and structure, i.e., ranging 13,491-13,502 bp, including 12 protein-coding genes, 2 ribosomal genes, 22 tRNA genes, and 2 major non-coding regions. All the genes were localized at the same strand and had the same transcription direction. A total of 745 variable sites were identified, accounting for 5.5%. Among the variable sites, 59 were deletion/insert mutations, 105 transversions, and 581 transitions. The variable sites distributed evenly at the complete genome. CONCLUSION: The study reveals the mutation profile in the whole MT genome of A. cantonensis and thus will facilitate the development of intraspecific differential diagnosis.

[Investigation on the species distribution and infection status of host snails of Angiostrongylus cantonensis in Shanghai].

OBJECTIVE: To investigate the species distribution and infection status of host snails of Angiostongylus cantonensis in Shanghai. METHODS: From August 2012 to October 2014, 10 districts or counties were selected for this investigation in Shanghai, including Jiading, Qingpu, Putuo, Baoshan, Yangpu, Minhang, Songjiang, Jinshan, Chongming, and Pudong. All of the snails were examined by lung-microscopy and tissue homogenate methods. RESULTS: Totally 1074 snail samples were identified, belonging to 8 families, 10 species, including Pomacea canaliculata (133), Achatina fulica (25), Cipangopaludina chinensis (183), Bellamya aeruginosa (78), Physa acuta (349), Radix swinhoei (224), Bradybaena similaris (45), B. ravida sieboldiana (32), Limax flavus (2), and Philomycus bilineatus (3). A. fulica was sold in market, and was not found in the field. The natural population of P. canaliculata was found in the field in Jinze Town of Qingpu District. A. cantonensis larvae were not detected. CONCLUSION: No snails were found to be infected with A. cantonensis in Shanghai. Attention needs to be paid to the monitoring of P. canaliculata.

The complete mitochondrial genome of the rodent intra-arterial nematodes Angiostrongylus cantonensis and Angiostrongylus costaricensis.

The two rodent intra-arterial nematodes, Angiostrongylus cantonensis and Angiostrongylus costaricensis, can cause human ill-health. The present study aimed to characterize and compare the mitochondrial (mt) genomes of these two species, and clarify their phylogenetic relationship and the position in the phylum Nematoda. The complete mt genomes of A. cantonensis and A. costaricensis are 13,497 and 13,585 bp in length, respectively. Hence, they are the smallest in the class of Chromadorea characterized thus far. Like many nematode species in the class of Chromadorea, they encode 12 proteins, 22 transfer RNAs, and two ribosomal RNAs. All genes are located on the same strand. Nucleotide identity of the two mt genomes is 81.6%, ranging from 77.7% to 87.1% in individual gene pairs. Our mt genome-wide analysis identified three major gene arrangement patterns (II-1, II-2, and II-3) from 48 nematode mt genomes. Both patterns II-1 and II-2 are distinct from pattern II-3, which covers the Spirurida, supporting a closer relationship between Ascaridida and Strongylida rather than Spirurida. Thymine (T) was highly concentrated on coding strands in Chromadorea, but balanced between the two strands in Enoplea, probably due to the gene arrangement pattern. Interestingly, the gene arrangement pattern of mt genomes and phylogenetic analysis based on concatenated amino acids indicated a closer relationship between the order Ascaridida and Rhabditida rather than Spirurida as indicated in previous studies. These discrepancies call for new research, reassessing the position of the order of Ascaridida in the phylogenetic tree. Once consolidated, the findings are important for population genetic studies and target identification.

[Population genetics of Pomacea spp. in mainland of China].

OBJECTIVE: To reveal the population structure of Pomacea spp. using genetic markers so as to provide the evidence for studying the invasion and expansion of it in the mainland of China. METHODS: The genetics of 581 specimens of Pomacea spp. from 60 sites was analyzed by sequencing CO I gene. The diversity of nucleotide and haplotypes were calculated in DnaSP 5.10.01. The haplotype network analysis was performed in Network 4.2.0.1. A phylogenetic tree was produced based on the haplotypes from the present study and those available from GenBank in order to understand the taxonomic status of Pomacea spp. in China. RESULTS: A total of 556 sequences were acquired in the present study and produced 25 unique haplotypes. Six haplotypes frequently occurred in the specimens and accounted for 96.0%. The phylogenetic analysis identified two Pomacea species in China, i. e. P. canaliculata and P. insularum. The usage of haplotypes of P. insularum in China reversed from the existing pattern in other countries. CONCLUSION: The complexity of population structure of Pomacea spp. in the mainland of China indicates multi-original introduction and complicated expansion patterns.